Crate noodles_vcf

noodles-vcf handles the reading and writing of the VCF format.

Examples

Read all records from a file

use noodles_vcf as vcf;

let mut reader = vcf::io::reader::Builder::default().build_from_path("sample.vcf")?;
let header = reader.read_header()?;

for result in reader.records() {
    let record = result?;
    // ...
}

Re-exports

• pub use self::header::Header;
• pub use self::record::Record;
• pub use self::async::io::Reader as AsyncReader;
• pub use self::async::io::Writer as AsyncWriter;

Modules

• async
  Async VCF.
• header
  VCF header and fields.
• io
  VCF I/O.
• record
  VCF record.
• variant
  Variant format.

Functions

• index
  Indexes a bgzipped-compressed VCF file.